University of Oulu

Huijong Han, Petri Kursula, Crystallographic anomalous diffraction data for the experimental phasing of two myelin proteins, gliomedin and periaxin, In Data in Brief, Volume 11, 2017, Pages 552-556, ISSN 2352-3409, https://doi.org/10.1016/j.dib.2017.02.049.

Crystallographic anomalous diffraction data for the experimental phasing of two myelin proteins, gliomedin and periaxin

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Author: Han, Huijong1; Kursula, Petri1,2
Organizations: 1Faculty of Biochemistry and Molecular Medicine, University of Oulu
2Department of Biomedicine, University of Bergen
Format: article
Version: published version
Access: open
Online Access: PDF Full Text (PDF, 0.4 MB)
Persistent link: http://urn.fi/urn:nbn:fi-fe201710058892
Language: English
Published: Elsevier, 2017
Publish Date: 2017-10-05
Description:

Abstract

We present datasets that can be used for the experimental phasing of crystal structures of two myelin proteins. The structures were recently described in the articles “Periaxin and AHNAK nucleoprotein 2 form intertwined homodimers through domain swapping” (H. Han, P. Kursula, 2014) [1] and “The olfactomedin domain from gliomedin is a β-propeller with unique structural properties” (H. Han, P. Kursula, 2015) [2]. Crystals of periaxin were derivatized with tungsten and xenon prior to data collection, and diffraction data for these crystals are reported at 3 and 1 wavelengths, respectively. Crystallographic data for two different pressurizing times for xenon are provided. Gliomedin was derivatized with platinum, and data for single-wavelength anomalous dispersion are included. The data can be used to repeat the phasing experiments, to analyze heavy atom binding sites in proteins, as well as to optimize future derivatization experiments of protein crystals with these and other heavy-atom compounds.

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Series: Data in brief
ISSN: 2352-3409
ISSN-E: 2352-3409
ISSN-L: 2352-3409
Volume: 11
Pages: 552 - 556
DOI: 10.1016/j.dib.2017.02.049
OADOI: https://oadoi.org/10.1016/j.dib.2017.02.049
Type of Publication: A1 Journal article – refereed
Field of Science: 1182 Biochemistry, cell and molecular biology
Subjects:
Funding: This work was financially supported by Academy of Finland (grant 252066), Sigrid Jusélius Foundation (Finland), and Emil Aaltonen Foundation (Finland).
Academy of Finland Grant Number: 252066
Detailed Information: 252066 (Academy of Finland Funding decision)
Dataset Reference: The supplementary file archive contains the following crystallographic dataset files, which correspond to the data listed in Table 1, as reflected by their nomenclature: XDS_ASCII-gldn-pt.HKL, XDS_ASCII-prx-nat.HKL, XDS_ASCII-prx-W-inf.HKL, XDS_ASCII-prx-W-peak.HKL, XDS_ASCII-prx-W-rem.HKL, XDS_ASCII-prx-xe-2min.HKL
  https://ars.els-cdn.com/content/image/1-s2.0-S2352340917300689-mmc2.zip
Copyright information: © 2017 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
  https://creativecommons.org/licenses/by/4.0/