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Discovery and analysis of RNA viruses in insects |
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| Author: | Viljakainen, Lumi1; Jurvansuu, Jaana1 |
| Organizations: |
1University of Oulu, Ecology and Genetics Research Unit, PO Box 3000, 90014 Oulu, Finland |
| Format: | article |
| Version: | accepted version |
| Access: | open |
| Online Access: | PDF Full Text (PDF, 0.5 MB) |
| Persistent link: | http://urn.fi/urn:nbn:fi-fe202003279552 |
| Language: | English |
| Published: |
Humana Press,
2020
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| Publish Date: | 2022-01-28 |
| Description: |
AbstractViruses are the most abundant pathogens on Earth infecting all cellular life forms. Only in recent years have we started to gain knowledge on insect viromes, thanks to the development of sequencing technologies. The discovery and characterization of insect viruses is important for understanding insect-virus interactions, coevolution, and insect immune defenses. We describe here a bioinformatic pipeline for the discovery of RNA viruses from insects based on RNA sequence data and the analysis of insect antiviral immune response against the discovered viruses by using small RNA sequence data. see all
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| Series: |
Springer protocols handbooks |
| ISSN: | 1949-2448 |
| ISSN-L: | 1949-2448 |
| Pages: | 191 - 200 |
| DOI: | 10.1007/978-1-0716-0259-1_12 |
| OADOI: | https://oadoi.org/10.1007/978-1-0716-0259-1_12 |
| Host publication: |
Immunity in insects |
| Host publication editor: |
Sandrelli, Federika Tettamanti, Gianluca |
| Type of Publication: |
A3 Book chapter |
| Field of Science: |
1181 Ecology, evolutionary biology |
| Subjects: | |
| Copyright information: |
© Springer Science+Business Media, LLC, part of Springer Nature 2020. This is a post-peer-review, pre-copyedit version of an article published in Springer Protocols Handbooks. The final authenticated version is available online at https://doi.org/10.1007/978-1-0716-0259-1_12. |